Purpose
This app imports phylogenetic tree and plot it as retangular phylogram. You can swap subtrees or reroot with a selected node.
Installation
Download the file, then drag-and-drop onto the Origin workspace. An icon will appear in the Apps gallery window.
Operation
- Click the icon in the Apps Gallery window to open a browse dialog.
- Select a data file (*.dnd, *.ph, *.nex, *.nxs, or *.txt) and click OK to plot a graph.
- Activate the graph page. Move cursor to a node and right click on it.
- In the context menu, click Swap Subtrees, Reroot with This Node or Reset Tree to change the phylogenetic tree.
Sample OPJU File
This app provides a sample OPJU file and a data file. Right click on the app icon in the Apps Gallery window, and choose Show Samples Folder from the short-cut menu. A folder will open. Drag-and-drop the project file PhylogeneticTreeSample.opju from the folder onto Origin. The Notes window in the project shows detailed steps.
Note: If you wish to save the OPJU after changing, it is recommended that you save to a different folder location (e.g. User Files Folder).